Table 1

Name, acronym and GenBank accession numbers of the selected begomovirus genome sequences used for study.

Begomoviruses

DNA-A*

DNA-B*

Acronym


Tomato leaf curl New Delhi virus- India [India: New Delhi:2005]

DQ169056

DQ169057

ToLCNDV-IN[IN:ND:05]


Tomato leaf curl New Delhi virus-India[India:Udaipur:Okra:2007]

EF035482

EF043394

ToLCNDV-IN-[IN:UD:Ok:07]


Tomato leaf curl New Delhi virus-Bangladesh

EF450316

NA

ToLCNDV-BD


Tomato leaf curl New Delhi virus -OM-Taiwan

GU180095

GU180096

ToLCNDV-[OM: Tai]


Tomato leaf curl New Delhi virus-Pakistan

EF620534

EF620535

ToLCNDV-Pak


Tomato leaf curl New Delhi virus - India-186b

GQ865546

NA

ToLCNDV-IN-186b


Tomato leaf curl New Delhi virus [India:Bangalore:OY135:2005]

GU112084

GU112085

ToLCNDV-IN[IN: Ban:05]


Tomato leaf curl New Delhi virus - India[Pakistan:Solanum nigrum:1997]

AJ620187

AJ620188

ToLCNDV-IN[PK: Sn: 97]


Tomato leaf curl New Delhi virus- India[India:New Delhi:Severe:1992]

U15015

U15017

ToLCNDV-IN[IN: ND: Svr:92]


Tomato leaf curl New Delhi virus-India [Bangladesh:Jessore: Severe:2005]

AJ875157

AJ875158

ToLCNDV-IN[BG:Jes:Svr:05]


Tomato leaf curl New Delhi virus-India [India: Lucknow]

Y16421

X89653

ToLCNDV-IN[IN: Luck]


Tomato leaf curl New Delhi virus -India [India: Happur: Potato: 2005]

EF043230

EF043233

ToLCNDV-IN[IN:Hap:Pot:05]


Tomato leaf curl New Delhi virus -India[India: Meerut: Potato: 2005]

EF043231

EF043232

ToLCNDV-IN[IN: Mer: Pot: 05]


Tomato leaf curl New Delhi virus-Thailand[Cucumber: Thailand]

AB330079

AB330080

ToLCNDV-TH[Cuc:Thai]


Tomato leaf curl New Delhi virus-India [India: New Delhi: Mild :1992]

U15016

NA

ToLCNDV-IN[IN: ND: Mld:92]


Tomato leaf curl New Delhi virus-Thailand [Luffa:Thailand]

AF102276

NA

ToLCNDV-TH[TH: Luf]


Tomato leaf curl New Delhi virus-India [India: New Delhi:Papaya:2005]

DQ989325

NA

ToLCNDV-IN[IN:ND:Pap:05]


Tomato leaf curl New Delhi virus [India:Aurangabad:OY164A:2006]

GU112088

GU112089

ToLCNDV-IN[IN: Aug: 06]


Tomato leaf curl New Delhi virus [India:Nagpur:Eggplant:2009]

HQ264185

HQ264186

ToLCNDV-IN[IN:Nag:Egg:09]


Tomato leaf curl Palampur virus-India

AM884015

AM992534

ToLCPMV


Squash leaf curl China virus [Pumpkin :Coimbatore]

AY184487

AY184488

SLCCV-IN[Pump:Coi]


Tomato yellow leaf curl Kanchanaburi virus[Thailand Kanchanaburi 2: Eggplant: 2001]

AF511530

AF511528

TYLCKaV-TH[TH:Kan2:Egg:01]


Tomato yellow leaf curl Kanchanaburi virus[Vietnam: Binhudong: Eggplant:2005]

DQ641702

NC_005811

TYLCKaV-TH[Vn:Bin:Egg:05]


The ToLCNDV variant under study is written in bold.

Pratap et al. Virology Journal 2011 8:305   doi:10.1186/1743-422X-8-305

Open Data