RDP screenshots displaying the possible recombination events associated with Asia1/WHN/CHA/06. The y-axis indicates the pairwise identity that refers to the average pairwise sequence identity within a 30nt sliding window moved one nucleotide at a time. The area outlined in pink demarcates the potential recombination regions. Crossover sites were indicated by arrows with nt positions above.
Yang et al. Virology Journal 2011 8:175 doi:10.1186/1743-422X-8-175