Table 3

Comparison of insertions/deletions within the nonpathogenic Spanish 6918 myxoma virus strain and Danish clinical samples

Country of origin/sample


ES***1

DK2

DK

DK

DK

DK


Locus

Lausanne (wt)

Strain 6918 (mut)

7889

8605

8620

8773

8770

Cunivak


M135R

TGTGGGGGTG

TGTGGGGGGTG (+G)

mut

mut

mut

mut

wt

wt


M009L

TCCATCGACATCCA

TC-CA (-CATCGACATC)

wt

wt

wt

wt

wt

n.d.*


M036L

ACCCCCAGT

ACCCCCCAGT (+C)

wt

wt

wt

wt

wt

n.d.*


M148R

ACCCCCCTTC

ACCC-CCTTC (-C)

wt

wt

wt

wt

wt **

wt**


M138L/M139R

ATTTTTTTTGTG

ATTT-TTTTGTG (-T)

mut

mut

mut

mut

wt

wt


M153R/M154R

CTTTTTTTTAAC

CTTT-TTTTAAC (-T)

wt

wt

wt

wt

wt

mut


* n.d. = not determined since no PCR product was obtained

** two separate single point mutations within this coding sequence were observed, one of which was common to the sequences of the Cunivak and 8770 samples.

*** data from [14]

1: ES = Spain

2: DK = Denmark

Belsham et al. Virology Journal 2010 7:7   doi:10.1186/1743-422X-7-7

Open Data