Table 1

List of miRNAs found to be differentially deregulated under ToLCNDV (2A+2B) agroinfection in microarray analysis.

miRNA

Fold (↑ or ↓)

Target protein class

Function

References


miR160

↓, 2X

Auxin response factors

Hormone signaling and plant development

[50]


miR162

↑, 2X

Dicer-like (DCL) protein

Plant development

[39]


miR168

↑, 2X

ARGONAUTE (AGO) protein

Plant development

[40,51]


miR169

↓, 2X

CBF HAP2-like factors

Abiotic stress responses

[52]


miR171

↓, 2X

Scarecrow- like (GRAS domain) TFs

Flowering time

[11]


miR172

↑, ~4X

APETALA-2 (AP2) like TFs

Floral identity and phase transition

[13,17]


miR319

↑, ~4X

TCP, bHLH TF

Leaf patterning

[19]


miR391

↓, 3X

Not known

Not known


miR396

↑, 2X

GRL TFs, Rhodanase like proteins

Defense responses

[23]


miR397

↑, 1.5X

Laccases, b -6 tubulin

Fungal infection

[7,23]


miR398

↑, 3X

Copper superoxide dismutases (CSD1/2)

Abiotic stress

[43]


miR408

↑, 1.5X

Plantacyanin

Stress responses

[23]


miR447

↑, 2.5X

2-Phosphoglycerate kinase

Metabolic pathway

[7]


Naqvi et al. Virology Journal 2010 7:281   doi:10.1186/1743-422X-7-281

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