Table 1 |
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|
Functional distribution of differentially expressed genes at 3, 7 hpi time points |
|||||||
|
Gene function category |
Number of genes |
Up regulated |
Down regulated |
FC < 1.8 |
|||
|
|
|||||||
|
3 hpi |
7 hpi |
3 hpi |
7 hpi |
3 hpi |
7 hpi |
||
|
|
|||||||
|
transporter |
122 |
10 |
8 |
43 |
88 |
69 |
26 |
|
transmembrane receptor |
19 |
3 |
3 |
5 |
13 |
11 |
3 |
|
translation regulator |
16 |
5 |
5 |
5 |
9 |
6 |
2 |
|
transcription regulator |
261 |
12 |
12 |
107 |
197 |
142 |
52 |
|
phosphatase |
48 |
2 |
1 |
17 |
33 |
29 |
14 |
|
peptidase |
48 |
4 |
4 |
9 |
27 |
35 |
17 |
|
other |
1278 |
128 |
104 |
452 |
852 |
697 |
322 |
|
microRNA |
1 |
- |
- |
1 |
1 |
0 |
0 |
|
ligand-dependent nuclear receptor |
7 |
- |
- |
1 |
4 |
6 |
3 |
|
kinase |
134 |
8 |
4 |
58 |
96 |
68 |
34 |
|
ion channel |
11 |
- |
- |
5 |
9 |
6 |
2 |
|
growth factor |
8 |
1 |
1 |
4 |
4 |
3 |
3 |
|
G-protein coupled receptor |
13 |
1 |
2 |
8 |
10 |
3 |
3 |
|
enzyme |
308 |
32 |
31 |
89 |
199 |
187 |
78 |
|
cytokine |
5 |
2 |
2 |
1 |
1 |
2 |
2 |
|
|
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|
Alkhalil et al. Virology Journal 2010 7:173 doi:10.1186/1743-422X-7-173 |
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