Table 1

Functional distribution of differentially expressed genes at 3, 7 hpi time points

Gene function category

Number of genes

Up regulated

Down regulated

FC < 1.8


3 hpi

7 hpi

3 hpi

7 hpi

3 hpi

7 hpi


transporter

122

10

8

43

88

69

26

transmembrane receptor

19

3

3

5

13

11

3

translation regulator

16

5

5

5

9

6

2

transcription regulator

261

12

12

107

197

142

52

phosphatase

48

2

1

17

33

29

14

peptidase

48

4

4

9

27

35

17

other

1278

128

104

452

852

697

322

microRNA

1

-

-

1

1

0

0

ligand-dependent nuclear receptor

7

-

-

1

4

6

3

kinase

134

8

4

58

96

68

34

ion channel

11

-

-

5

9

6

2

growth factor

8

1

1

4

4

3

3

G-protein coupled receptor

13

1

2

8

10

3

3

enzyme

308

32

31

89

199

187

78

cytokine

5

2

2

1

1

2

2


Alkhalil et al. Virology Journal 2010 7:173   doi:10.1186/1743-422X-7-173

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