Table 17

The predicted HLA Class 1 CTL epitopes in HIV-1 Vpr

Location of the predicted epitope

Amino acid sequence

HLA allele


7 – 15

DQGPQREPY

B62

8 – 16

QGPQREPYN

Dd

11 – 19

QREPYNEWM

B_2705

14 – 22

PYNEWMLDL

A24, Kd

18 – 26

WMLDLLEDL

A_0201, A_0205, B_2705, B_3901, Db_revised, Kd

26 – 34

LKHEAVRHF

Cattle_A20

31 – 39

VRHFPRPWL

B_2705

34 – 42

FPRPWLHEL

B7, Cw_0401

38 – 46

WLHELGQQI

A_0201

39 – 47

LHELGQQIY

B_3801

49 – 57

TYGDTWEGV

Kd

60 – 68

IVRTLQQLL

B7

61 – 69

VRTLQQLLF

B_2702, B_2705

64 – 72

LQQLLFVHF

B62, B_2705, B_3902

65 – 73

QQLLFVHFR

A_3101, B_2705, Cattle_A20

66 – 74

QLLFVHFRI

A_0201

72 – 80

FRIGCQHSR

B_2705, Cattle_A20

79 – 87

SRIGIIRGR

B_2705, Cattle_A20

87 – 95

RRGRNGSGR

B_2705, Cattle_A20


Srinivasan et al. Virology Journal 2008 5:99   doi:10.1186/1743-422X-5-99

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