Table 1

Gag peptides and predicted CTL epitopes
Peptide number	Peptide Sequence	aa	Predicted CTL Epitope	aa	Code

20	SLYNTVATLYCVHQR	78–91	LYNTVATL	78–85	LYN
21	TVATLYCVHQRIEVK	81–95	LYCVHQRI	85–92	LYC
39	NAWVKVVEEKAFSPE	153–167	CD4 epitope	-	-
42	SPEVIPMFSALSEGA	165–179	MFSALSEGA	171–179	MFS
49	GHQAAMQMLKETINE	193–207	AMQMLKET	197–205	AMQ
50	AMQMLKETINEEAAE	197–211	AMQMLKET	197–205	AMQ
53	AAEWDRLHPVHAGPI	209–223	Not identified	-	-
65	PVGEIYKRWIILGLN	257–271	IYKRWIILGL	261–270	IYK
69	IVRMYSPTSILDIRQ	273–287	MYSPTSILDI	276–285	MYS
75	VDRFYKTLRAEQASQ	297–311	CD4 epitope	-	-
76	YKTLRAEQASQEVKN	301–315	Not identified	-	-
80	MTETLLVQNANPDCK	317–331	Not identified	-	-

Cellini et al. Virology Journal 2008 5:81 doi:10.1186/1743-422X-5-81