Table 3

Description of amino acid differences among the selected DENV-3 from Taiwan and other countries as compared to reference strain H87
Geno
 V
 V
 I
 I
 I
 I
 II
 II
 II
 II
 II
 III
 III
 III
 III
Strain*
 H87
 80-2
 Ind88
 Ind04
 TW95
 Ind98
 Tha94
 Sing95
 Tw182
 Tw358
 Tw368
 TW99
 Martini
 SriLan
 Brazil
Year
 56'
 80'
 88'
 04'
 94'
 98'
 94'
 95'
 98'
 98'
 98'
 99'
 99'
 00'
 02'
Capsid
35**
 R







K
 K
 K
 K
 K
 K
65
 V
I
 I
I








82
 K
R
 R
 R
 R








97
 K
R
 R
 R
 R






Q
108
 M





I


I
 I
 I
 I
112
 T









A
 A
 A
 A
prM
55
 H
L
 L
 L
 L
 L
 L
 L
 L
 L



57
 T




A
 A
 A
 A
 A



128
 L
F
 F
 F
 F








Envelope
68
 I
V
 V
 V
 V
 V







81
 I









V
 V
 V
 V
124
 S

L
L
 P
 P
 P
 P
 P
 P
 P
 P
 P
132
 H







Y
 Y
 Y
 Y
 Y
 Y
154
 E




D
 D
 D
 D
 D



160
 A




V
 V
 V
 V
 V



169
 A

V
 V
 V
V
 V
 V
 V
 H
 T
 T
 T
231
 R

K
 K
 K








270
 T




N
 N
 N
 N
 N
 N
 N
 N
 N
301
 L

S
S




T
 T
 T
 T
303
 T
A
 A
 A
 A








383
 K









N
 N
 N
452
 I









V
 V
 V
 V
479
 A

V
 V
 V
 V

V
 V



NS1
178
 L




S
 S
 S
 S
 S



188
 V




I
 I
 I
 I
 I



217
 L




F
 F
 F
 F
 F



339
 N









S
 S
 S
 S
NS2A
37
 L









F
 F
 F
 F
55
 H
R
 R
R








133
 A




T
 T
 T
 T
 T



153
 T
M
 M
 M









175
 I




V
 V
 V
 V
 V
 V
 V
 V
 V
NS3
115
 I









T
 T
 T
 T
255
 R
K
 K
 K
 K








324
 D




E
 E
 E
 E
 E



350
 E
D
 D
D








356
 V
A
 A
A




A
 A
 A
 A
452
 V




A
 A
 A
 A
 A
 A
 A
 A
 A
589
 K




R
 R
 R
 R
 R
 R


NS4A
89
 I
V
 V
 V
 V








99
 D









E
 E
 E
 E
148
 V









I
 I
 I
 I
115
 V









I
 I
 I
 I
190
 L
F
 F
 F
 F








NS4B
116
 V









I
 I
 I
 I
191
 L
F
 F
 F
 F








NS5
281
 K

R
 R
 R








288
 S









N
 N
 N
 N
336
 M
T
 T
 T
 T








422
 R

K






K
 K
 K
 K
585
 K









T
 T
 T
 T
619
 I




V
 V
 V
 V
 V
 V
V
749
 R
K
 K
 K
 K
 K
 K
 K
 K
 K



835
 D









N
 N
 N
 N
876
 N




D
 D
 D
 D
 D



*The GeneBank accession numbers for the strains of DENV-3 compared are H87: M93130; 80-2: AF317645; Ind88: AY858038; Ind04: AY858040; TW95: DQ675519; Ind98: AY858039; Tha94: AY923865. Sing95: AY766104; TW182: DQ675520; TW358: DQ675522; TW368: DQ675525; TW99: DQ675533; Martini: AY099337; SriLan: AY099336; Brazil: AY679147.

**A blank cell indicates an amino acid identical to that of strain H87.

King et al. Virology Journal 2008 5:63   doi:10.1186/1743-422X-5-63