ResearchGenetic diversity among five T4-like bacteriophages1 Department of Biological Sciences, University of New Orleans, 2000 Lakeshore Dr., New Orleans, LA 70148, USA 2 Department of Biochemistry, Tulane University Health Sciences Center, 1430 Tulane Ave., New Orleans, LA 70112, USA 3 LMGM-CNRS UMR 5100,118, route de Narbonne, 31062 Toulouse cedex 09, France
Virology Journal 2006, 3:30doi:10.1186/1743-422X-3-30
Additional filesAdditional File 1: High-resolution genome map. Genome map is as indicated for Figure 1, but predicted gene names are also indicated. Format: PDF Size: 137KB Download file This file can be viewed with: Adobe Acrobat Reader Additional File 2: Predicted transmembrane and signal peptide matches for ORFs. The amino acid coordinates of each ORF matching Transmembrane [22] orSignal peptide [21] motifs are indicated for each ORF. Multiple transmembrane regions are predicted for some ORFs. Format: XLS Size: 16KB Download file This file can be viewed with: Microsoft Excel Viewer Additional File 3: Coordinates of predicted early promoters. Coordinates are in GFF format. For promoters on + strand, the 5' end of the sequence is the leftmost coordinate, for promoters on – strand, the 5' end of sequence is the rightmost coordinate. Promoters are named by their 5' end; those that differ in length from the consensus are noted. Format: XLS Size: 44KB Download file This file can be viewed with: Microsoft Excel Viewer Additional File 4: Coordinates of predicted middle promoters. Coordinates are in GFF format. For promoters on + strand, the 5' end of the sequence is the leftmost coordinate, for promoters on – strand, the 5' end of sequence is the rightmost coordinate. Promoters are named by their 5' end; those that differ in length from the consensus are noted. Format: XLS Size: 14KB Download file This file can be viewed with: Microsoft Excel Viewer Additional File 5: Coordinates of predicted late promoters. Coordinates are in GFF format. For promoters on + strand, the 5' end of the sequence is the leftmost coordinate, for promoters on – strand, the 5' end of sequence is the rightmost coordinate. Promoters are named by their 5' end. Format: XLS Size: 24KB Download file This file can be viewed with: Microsoft Excel Viewer Additional File 6: Coordinates of Predicted rho-independent terminators. Coordinates are in GFF format. For promoters on + strand, the 5' end of the sequence is the leftmost coordinate, for promoters on – strand, the 5' end of sequence is the rightmost coordinate. Bidirectional terminators have the strand designation "." Terminators are named according to their flanking genes. Format: XLS Size: 47KB Download file This file can be viewed with: Microsoft Excel Viewer |





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