|
Amino acid sequence of the VV protein E6R and identified peptides Peptides detected from the Method 1 (SDS-PAGE + LC-ESI-Q-TOF MS), Method 2 (SDS-PAGE + LC-ESI-QIT MS), Method 3 (HPLC + LC-ESI-QIT MS), Method 4 (LC-ESI-Q-TOF MS), and Method 5 (MALDI-TOF/TOF MS) are denoted with an asterisk (*). Peptides that are in bold print have been identified by at least one of the five methods. |
|
| Method |
MDFIRRKYLIYTVENNIDFLKDDTLSKVNNFTLNHVLALKYLVSNFPQHV |
| 1 |
*********************** |
| 2 |
******************** ********** |
| 3 |
|
| 4 |
|
| 5 |
|
| ITKDVLANTNFFVFIHMVRCCKVYEAVLRHAFDAPTLYVKALTKNYLSFS |
|
| 1 |
*** *********** |
| 2 |
*** *********** |
| 3 |
|
| 4 |
|
| 5 |
|
| NAIQSYKETVHKLTQDEKFLEVAEYMDELGELIGVNYDLVLNPLFHGGEP |
|
| 1 |
|
| 2 |
|
| 3 |
|
| 4 |
******************************** |
| 5 |
|
| IKDMEIIFLKLFKKTDFKVVKKLSVIRLLIWAYLSKKDTGIEFADNDRQD |
|
| 1 |
************* |
| 2 |
|
| 3 |
|
| 4 |
** |
| 5 |
** |
| IYTLFQQTGRIVHSNLTETFRDYIFPGDKTSYWVWLNESIANDADIVLNR |
|
| 1 |
********** |
| 2 |
******** |
| 3 |
|
| 4 |
|
| 5 |
********************* |
| HAITMYDKILSYIYSEIKQGRVNKNMLKLVYIFEPEKDIRELLLEIIYDI |
|
| 1 |
************ |
| 2 |
******** |
| 3 |
|
| 4 |
|
| 5 |
|
| PGDILSIIDAKNDDWKKYFISFYKANFINGNTFISDRTFNEDLFRVVVQI |
|
| 1 |
***** |
| 2 |
******** |
| 3 |
|
| 4 |
******** |
| 5 |
***** |
| DPEYFDNERIMSLFSTSAADIKRFDELDINNSYISNIIYEVNDITLDTMD |
|
| 1 |
********************** |
| 2 |
|
| 3 |
|
| 4 |
|
| 5 |
********* |
| DMKKCQIFNEDTSYYVKEYNTYLFLHESDPMVIENGILKKLSSIKSKSKR |
|
| 1 |
|
| 2 |
|
| 3 |
|
| 4 |
|
| 5 |
|
| LNLFSKNILKYYLDGQLARLGLVLDDYKGDLLVKMINHLKSVEDVSAFVR |
|
| 1 |
*************** |
| 2 |
****** ******************************* |
| 3 |
|
| 4 |
|
| 5 |
|
| FSTDKNPSILPSLIKTILASYNISIIVLFQRFLRDNLYHVEEFLDKSIHL |
|
| 1 |
************ |
| 2 |
|
| 3 |
|
| 4 |
|
| 5 |
|
| TKTDKKYILQLIRHGRS |
|
| 1 |
|
| 2 |
|
| 3 |
|
| 4 |
|
| 5 |
******* |
Yoder et al. Virology Journal 2006 3:10 doi:10.1186/1743-422X-3-10 |
|