Table 4

Percent nucleotide identity of the L protein, P1 capsid, P2 non-structural, P3 non-structural and 3′UTR regions of Sing-M105-02 compared to Sing-M100-02 and other EMCV strains
Virus strain Proposed lineage L P1 P2 P3 3′ UTR
Sing-M100-02 D 100.0 99.9 99.9 100.0 100.0
EMCV Ruckert (M81861) A 79.1 75.6 74.9 74.8 84.1
EMCV pV21 (X74312) 79.1 75.6 74.7 75.0 85.7
EMCV PV2 (X87335) 80.1 74.9 75.4 74.8 85.6
EMCV B (M22457) 79.1 74.9 75.1 74.7 85.4
EMCV D (M22458) 80.1 75.0 75.1 74.7 85.6
EMCV Mengo M (L22089) C 81.6 76.1 74.5 74.9 87.9
EMCV 1086C (DQ835185) B 86.1 75.5 73.1 73.3 NA
EMCV RD1338 (JX257003) E 80.1 67.7 76.4 77.3 81.2

The proposed EMCV lineage is also indicated. The virus strains names are shown followed by the GenBank accession number in brackets. NA indicates sequence data not available.

Yeo et al.

Yeo et al. Virology Journal 2013 10:248   doi:10.1186/1743-422X-10-248

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