Table 1

Gene distribution of the three functional categories with the highest number of statistically significant genes according to MIPS Functional Catalogue Database
Induced Repressed
% %
Subcellular localization
cell wall 3 1
plasma membrane/membrane attached 5 2
cytoplasm 9 4
cytoskeleton 1 0
endoplasmic reticulum 3 1
golgi 1 0
intracellular transport vesicles 2 1
nucleus 13 6
mithocondrion 31 14
plastid 32 15
Protein fate
protein folding and stabilization 20 10
protein targeting sortening and translocation 7 0
protein modification 60 51
assembly of protein complexes 7 0
protein/peptid degradation 7 39
Metabolism
aminoacid metabolism 5 10
nitrogen, selenium and sulfur metabolism 5 4
nucleotide/nucleoside/nucleobase metabolism 6 9
phosfate metabolis 19 29
c-compound and carbohydrate metabolism 35 26
lipid, fatty acid and isoprenoid metabolism 14 11
metabolism of vitamins, cofactors and prosthetic groups 5 3
secondary metabolism 11 9

Herranz et al.

Herranz et al. Virology Journal 2013 10:164   doi:10.1186/1743-422X-10-164

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